ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6v3kA2 - ECOD Domain | ECOD

ECOD/Domains/e6v3kA2

e6v3kA2

UID: 002579204

PDB

Range: A:1-48
PDB: 6V3K chain A(all domains)
UniProt: Q76353 (all domains)

Molecule: Chimeric Sso7d and HIV-1 integrase

3D Structure

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Related Domains

Browse other domains in Integrase_Zn →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyIntegrase_Zn(101.1.1.14)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02022Integrase_Zn

Integrase Zinc binding domain

ClanCL0123HTH

External Links

ECOD PDB View: 6V3K RCSB PDB: 6V3K PDBe: 6V3K UniProt: Q76353

Downloads

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