ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jbsA2 - ECOD Domain | ECOD

ECOD/Domains/e6jbsA2

e6jbsA2

UID: 002579247

PDB

Range: A:409-666
PDB: 6JBS chain A(all domains)
UniProt: G8GLP2 (all domains)
Gene: Lxyl-p1-2

Molecule: Beta-D-xylosidase/beta-D-glucosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupBeta-D-glucan exohydrolase, C-terminal domain(2007.12)

TT-groupBeta-D-glucan exohydrolase, C-terminal domain(2007.12.1)

FFamilyGlyco_hydro_3_C(2007.12.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer.

Pfam Families

PF01915Glyco_hydro_3_C

Glycosyl hydrolase family 3 C-terminal domain

External Links

ECOD PDB View: 6JBS RCSB PDB: 6JBS PDBe: 6JBS UniProt: G8GLP2

Downloads

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Drug annotations from DrugDomain.