ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nyuB1 - ECOD Domain | ECOD

ECOD/Domains/e6nyuB1

e6nyuB1

UID: 002580305

PDB

Range: B:155-288
PDB: 6NYU chain B(all domains)
UniProt: X5EH37 (all domains)
Gene: fakB1

Molecule: DegV domain-containing protein

3D Structure

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Related Domains

Browse other domains in DegV →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupDAK1/DegV C-terminal domain(301.13)

TT-groupDAK1/DegV C-terminal domain(301.13.1)

FFamilyDegV(301.13.1.1)

Ligands

in contact, ≤ 4 Å

Myristic acidMYR
drugDrugBank DB08231
Palmitic AcidPLM
drugDrugBank DB03796

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Uncharacterised protein, DegV family COG1307

ClanCL0245EDD

External Links

ECOD PDB View: 6NYU RCSB PDB: 6NYU PDBe: 6NYU UniProt: X5EH37

Downloads

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