ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wyaB2 - ECOD Domain | ECOD

ECOD/Domains/e2wyaB2

e2wyaB2

UID: 002581728

PDB

Range: B:223-316,B:340-508
PDB: 2WYA chain B(all domains)
UniProt: P54868 (all domains)
Gene: HMGCS2

Molecule: HYDROXYMETHYLGLUTARYL-COA SYNTHASE, MITOCHONDRIAL

3D Structure

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Related Domains

Browse other domains in HMG_CoA_synt_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiolase-like(7581)

HH-groupThiolase-like(7581.1)

TT-groupThiolase-like(7581.1.1)

FFamilyHMG_CoA_synt_C(7581.1.1.11)

Ligands

in contact, ≤ 4 Å

(S)-Hmg-CoaHMG
drugDrugBank DB03169

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF08540HMG_CoA_synt_C

Hydroxymethylglutaryl-coenzyme A synthase C terminal

ClanCL0046Thiolase

External Links

ECOD PDB View: 2WYA RCSB PDB: 2WYA PDBe: 2WYA UniProt: P54868

Downloads

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Drug annotations from DrugDomain.