ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pm9C1 - ECOD Domain | ECOD

ECOD/Domains/e6pm9C1

e6pm9C1

UID: 002582228

PDB

Range: C:49-340,C:370-371
PDB: 6PM9 chain C(all domains)
UniProt: O60502 (all domains)
Gene: OGA

Molecule: O-GlcNAcase TIM-barrel domain

3D Structure

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Related Domains

Browse other domains in NAGidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNAGidase(2002.1.1.150)

Ligands

in contact, ≤ 4 Å

(3aR,5S,6S,7R,7aR)-5-(difluoromethyl)-2-(ethylamino)-5,6,7,7a-tetrahydro-3aH-pyrano[3,2-d][1,3]thiazole-6,7-diolOQ1

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07555NAGidase

beta-N-acetylglucosaminidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6PM9 RCSB PDB: 6PM9 PDBe: 6PM9 UniProt: O60502

Downloads

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