ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6juqA4 - ECOD Domain | ECOD

ECOD/Domains/e6juqA4

e6juqA4

UID: 002582401

PDB

Range: A:1-22,A:76-177
PDB: 6JUQ chain A(all domains)
UniProt: W8STT9 (all domains)
Gene: dinB

Molecule: DNA polymerase IV

3D Structure

Loading viewer...

Related Domains

Browse other domains in IMS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyIMS(304.48.1.10)

Ligands

in contact, ≤ 4 Å

5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine2TM
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

impB/mucB/samB family

External Links

ECOD PDB View: 6JUQ RCSB PDB: 6JUQ PDBe: 6JUQ UniProt: W8STT9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure