ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qkkF1 - ECOD Domain | ECOD

ECOD/Domains/e6qkkF1

e6qkkF1

UID: 002582838

PDB

Range: F:20-224
PDB: 6QKK chain F(all domains)
UniProt: Q8WSF8 (all domains)
Gene: LOC100533247

Molecule: Soluble acetylcholine receptor

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

4-[5-[(1~{R},2~{R},4~{S})-7-azabicyclo[2.2.1]heptan-2-yl]-2-fluoranyl-pyridin-3-yl]benzamideH92

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 6QKK RCSB PDB: 6QKK PDBe: 6QKK UniProt: Q8WSF8

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.