ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6s4hA1 - ECOD Domain | ECOD

ECOD/Domains/e6s4hA1

e6s4hA1

UID: 002583031

PDB

Range: A:12-484
PDB: 6S4H chain A(all domains)
UniProt: P00489 (all domains)
Gene: PYGM

Molecule: Glycogen phosphorylase, muscle form

3D Structure

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Related Domains

Browse other domains in Phosphorylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyPhosphorylase(7512.1.1.2)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
(2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-6-(2-phenyl-1~{H}-imidazol-4-yl)oxane-3,4,5-triolKUQ

+ 1 additive (Dimethyl sulfoxide)

Pfam Families

PF00343Phosphorylase

Carbohydrate phosphorylase

ClanCL0113GT-B

External Links

ECOD PDB View: 6S4H RCSB PDB: 6S4H PDBe: 6S4H UniProt: P00489

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxideDMS

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.