ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tugE1 - ECOD Domain | ECOD

ECOD/Domains/e6tugE1

e6tugE1

UID: 002583952

PDB

Range: E:241-430
PDB: 6TUG chain E(all domains)
UniProt: E6LHV2 (all domains)
Gene: csm6

Molecule: CRISPR system endoribonuclease Csm6

3D Structure

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Related Domains

Browse other domains in Cas_Csm6_HEPN →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHEPN(601.7)

TT-groupNucleotidyltransferase substrate binding subunit/domain(601.7.1)

FFamilyCas_Csm6_HEPN(601.7.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09659Cas_Csm6_HEPN

Cas_Csm6 HEPN domain

ClanCL0291KNTase_C

External Links

ECOD PDB View: 6TUG RCSB PDB: 6TUG PDBe: 6TUG UniProt: E6LHV2

Downloads

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