ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6s8vD1 - ECOD Domain | ECOD

ECOD/Domains/e6s8vD1

e6s8vD1

UID: 002588658

PDB

Range: D:109-437
PDB: 6S8V chain D(all domains)
UniProt: P08195 (all domains)
Gene: SLC3A2

Molecule: 4F2 cell-surface antigen heavy chain

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6S8V RCSB PDB: 6S8V PDBe: 6S8V UniProt: P08195

Downloads

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