ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6y1zA1 - ECOD Domain | ECOD

ECOD/Domains/e6y1zA1

e6y1zA1

UID: 002588835

PDB

Range: A:8-205
PDB: 6Y1Z chain A(all domains)
UniProt: P23979 (all domains)
Gene: Htr3a

Molecule: 5-hydroxytryptamine receptor 3A

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
PalonosetronO7B
drugDrugBank DB00377

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 6Y1Z RCSB PDB: 6Y1Z PDBe: 6Y1Z UniProt: P23979

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

TryptophanTRP

drugDrugBank DB00150

Shown in the structure viewer. Drug annotations from DrugDomain.