ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6jkuB1 - ECOD Domain | ECOD

ECOD/Domains/e6jkuB1

e6jkuB1

UID: 002591698

PDB

Range: B:-6-53,B:347-378
PDB: 6JKU chain B(all domains)
UniProt: Q9CMF5 (all domains)
Gene: nagA

Molecule: N-acetylglucosamine-6-phosphate deacetylase

3D Structure

Loading viewer...

Related Domains

Browse other domains in NagA_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupComposite domain of metallo-dependent hydrolases(65)

HH-groupComposite domain of metallo-dependent hydrolases(65.1)

TT-groupComposite domain of metallo-dependent hydrolases(65.1.1)

FFamilyNagA_N(65.1.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Phosphate ion, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

NagA composite domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6JKU RCSB PDB: 6JKU PDBe: 6JKU UniProt: Q9CMF5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.