ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jkuD1 - ECOD Domain | ECOD

ECOD/Domains/e6jkuD1

e6jkuD1

UID: 002591702

PDB

Range: D:0-53,D:347-378
PDB: 6JKU chain D(all domains)
UniProt: Q9CMF5 (all domains)
Gene: nagA

Molecule: N-acetylglucosamine-6-phosphate deacetylase

3D Structure

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Related Domains

Browse other domains in NagA_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupComposite domain of metallo-dependent hydrolases(65)

HH-groupComposite domain of metallo-dependent hydrolases(65.1)

TT-groupComposite domain of metallo-dependent hydrolases(65.1.1)

FFamilyNagA_N(65.1.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Phosphate ion, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

NagA composite domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6JKU RCSB PDB: 6JKU PDBe: 6JKU UniProt: Q9CMF5

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.