ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vloC1 - ECOD Domain | ECOD

ECOD/Domains/e6vloC1

e6vloC1

UID: 002593089

PDB

Range: C:1-318
PDB: 6VLO chain C(all domains)
UniProt: Q5UR12 (all domains)
Gene: MIMI_R141

Molecule: Putative dTDP-D-glucose 4,6-dehydratase

3D Structure

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Related Domains

Browse other domains in GDP_Man_Dehyd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGDP_Man_Dehyd(2003.1.1.72)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Thymidine-5'- DiphosphateTYD
drugDrugBank DB03103

Pfam Families

PF16363GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6VLO RCSB PDB: 6VLO PDBe: 6VLO UniProt: Q5UR12

Downloads

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NICKEL (II) ION

metal

Shown in the structure viewer. Drug annotations from DrugDomain.