ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rkfD1 - ECOD Domain | ECOD

ECOD/Domains/e6rkfD1

e6rkfD1

UID: 002594967

PDB

Range: D:3-195,D:283-335
PDB: 6RKF chain D(all domains)
UniProt: Q99489 (all domains)
Gene: DDO

Molecule: D-aspartate oxidase

3D Structure

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Related Domains

Browse other domains in DAO →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNucleotide-binding domain(2003.1.3)

FFamilyDAO(2003.1.3.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6RKF RCSB PDB: 6RKF PDBe: 6RKF UniProt: Q99489

Downloads

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Drug annotations from DrugDomain.