ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rp1C1 - ECOD Domain | ECOD

ECOD/Domains/e6rp1C1

e6rp1C1

UID: 002594996

PDB

Range: C:132-434,C:484-570
PDB: 6RP1 chain C(all domains)
UniProt: A0A0H3YL32 (all domains)

Molecule: Urease subunit alpha

3D Structure

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Related Domains

Browse other domains in Amidohydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAmidohydro_1(2002.1.1.83)

Ligands

in contact, ≤ 4 Å

Diamidophosphate2PA
NICKEL (II) IONNI
metal

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4

Pfam Families

PF01979Amidohydro_1

Amidohydrolase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6RP1 RCSB PDB: 6RP1 PDBe: 6RP1 UniProt: A0A0H3YL32

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.