ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6sdrB1 - ECOD Domain | ECOD

ECOD/Domains/e6sdrB1

e6sdrB1

UID: 002595012

PDB

Range: B:2-73,B:138-215
PDB: 6SDR chain B(all domains)
UniProt: Q72EJ0 (all domains)
Gene: DVU_0588

Molecule: Formate dehydrogenase, beta subunit, putative

3D Structure

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Related Domains

Browse other domains in Fer4_11 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4_11(205.1.1.17)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13247Fer4_11

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 6SDR RCSB PDB: 6SDR PDBe: 6SDR UniProt: Q72EJ0

Downloads

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