ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vfuC4 - ECOD Domain | ECOD

ECOD/Domains/e6vfuC4

e6vfuC4

UID: 002595200

PDB

Range: C:212-318
PDB: 6VFU chain C(all domains)
UniProt: Q8TAB3 (all domains)
Gene: PCDH19

Molecule: Protocadherin-19

3D Structure

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Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 6VFU RCSB PDB: 6VFU PDBe: 6VFU UniProt: Q8TAB3

Downloads

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