ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6lvsC1 - ECOD Domain | ECOD

ECOD/Domains/e6lvsC1

e6lvsC1

UID: 002596897

PDB

Range: C:100-374,C:401-484
PDB: 6LVS chain C(all domains)
UniProt: P54578 (all domains)
Gene: USP14

Molecule: Ubiquitin carboxyl-terminal hydrolase 14

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyUCH(219.1.1.3)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Sodium ionNA
metal

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT

Pfam Families

Ubiquitin carboxyl-terminal hydrolase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6LVS RCSB PDB: 6LVS PDBe: 6LVS UniProt: P54578

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01942

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.