ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6us5D4 - ECOD Domain | ECOD

ECOD/Domains/e6us5D4

e6us5D4

UID: 002598898

PDB

Range: D:298-468
PDB: 6US5 chain D(all domains)
UniProt: D9N168 (all domains)
Gene: DPO1

Molecule: DNA polymerase I

3D Structure

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Related Domains

Browse other domains in DNA_polI_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_polI_exo1(2484.1.1.96)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22619DNA_polI_exo1

DNA polymerase I, ribonuclease H-like domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 6US5 RCSB PDB: 6US5 PDBe: 6US5 UniProt: D9N168

Downloads

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