ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6u3yD1 - ECOD Domain | ECOD

ECOD/Domains/e6u3yD1

e6u3yD1

UID: 002600034

PDB

Range: D:10-111,D:132-284
PDB: 6U3Y chain D(all domains)
UniProt: B1Q017 (all domains)
Gene: lukS-PV

Molecule: Gamma-hemolysin subunit A

3D Structure

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Related Domains

Browse other domains in Leukocidin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupLeukocidin-like(11.13)

TT-groupLeukocidin-like(11.13.1)

FFamilyLeukocidin(11.13.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07968Leukocidin

Leukocidin/Hemolysin toxin family

ClanCL0636Leukocidin

External Links

ECOD PDB View: 6U3Y RCSB PDB: 6U3Y PDBe: 6U3Y UniProt: B1Q017

Downloads

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