ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dddA2 - ECOD Domain | ECOD

ECOD/Domains/e4dddA2

e4dddA2

UID: 002600407

PDB

Range: A:26-123,A:259-325
PDB: 4DDD chain A(all domains)
UniProt: Q2GGH8 (all domains)
Gene: ECH_0645

Molecule: Immunogenic protein

3D Structure

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Related Domains

Browse other domains in NMT1_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyNMT1_3(7523.1.1.32)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NMT1-like family

ClanCL0177PBP

External Links

ECOD PDB View: 4DDD RCSB PDB: 4DDD PDBe: 4DDD UniProt: Q2GGH8

Downloads

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