ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4g0oA1 - ECOD Domain | ECOD

ECOD/Domains/e4g0oA1

e4g0oA1

UID: 002600616

PDB

Range: A:561-699
PDB: 4G0O chain A(all domains)
UniProt: Q9SJK3 (all domains)
Gene: AGO5

Molecule: Protein argonaute 5

3D Structure

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Related Domains

Browse other domains in Piwi →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMiddle domain in Argonaute homologs(7590)

HH-groupMiddle domain in Argonaute homologs(7590.1)

TT-groupMiddle domain in Argonaute homologs(7590.1.1)

FFamilyPiwi(7590.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Piwi domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 4G0O RCSB PDB: 4G0O PDBe: 4G0O UniProt: Q9SJK3

Downloads

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