ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jy5H1 - ECOD Domain | ECOD

ECOD/Domains/e4jy5H1

e4jy5H1

UID: 000260113

PDB

Range: H:1-110
PDB: 4JY5 chain H(all domains)

Molecule: PGT122 heavy chain

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 4JY5 RCSB PDB: 4JY5 PDBe: 4JY5

Downloads

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