ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lnlB4 - ECOD Domain | ECOD

ECOD/Domains/e3lnlB4

e3lnlB4

UID: 002601263

PDB

Range: B:241-327
PDB: 3LNL chain B(all domains)
UniProt: P67273 (all domains)
Gene: SA1388

Molecule: UPF0135 protein SA1388

3D Structure

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Related Domains

Browse other domains in DUF34_NIF3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNIF3 (NGG1p interacting factor 3)-like(7509)

HH-groupNIF3 (NGG1p interacting factor 3)-like(7509.1)

TT-groupNIF3 (NGG1p interacting factor 3)-like(7509.1.1)

FFamilyDUF34_NIF3(7509.1.1.1)

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676
Zinc ionZN
metalwithin 5 Å only

Pfam Families

PF01784DUF34_NIF3

Duf34/NIF3 (NGG1p interacting factor 3)

External Links

ECOD PDB View: 3LNL RCSB PDB: 3LNL PDBe: 3LNL UniProt: P67273

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.