ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1nmoD1 - ECOD Domain | ECOD

ECOD/Domains/e1nmoD1

e1nmoD1

UID: 002601451

PDB

Range: D:1-96,D:213-247
PDB: 1NMO chain D(all domains)
UniProt: P0AFP6 (all domains)
Gene: ybgI

Molecule: Hypothetical protein ybgI

3D Structure

Loading viewer...

Related Domains

Browse other domains in DUF34_NIF3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNIF3 (NGG1p interacting factor 3)-like(7509)

HH-groupNIF3 (NGG1p interacting factor 3)-like(7509.1)

TT-groupNIF3 (NGG1p interacting factor 3)-like(7509.1.1)

FFamilyDUF34_NIF3(7509.1.1.1)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01784DUF34_NIF3

Duf34/NIF3 (NGG1p interacting factor 3)

External Links

ECOD PDB View: 1NMO RCSB PDB: 1NMO PDBe: 1NMO UniProt: P0AFP6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure