ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nmpB2 - ECOD Domain | ECOD

ECOD/Domains/e1nmpB2

e1nmpB2

UID: 002601458

PDB

Range: B:1-96,B:213-247
PDB: 1NMP chain B(all domains)
UniProt: P0AFP6 (all domains)
Gene: ybgI

Molecule: Hypothetical protein ybgI

3D Structure

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Related Domains

Browse other domains in DUF34_NIF3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNIF3 (NGG1p interacting factor 3)-like(7509)

HH-groupNIF3 (NGG1p interacting factor 3)-like(7509.1)

TT-groupNIF3 (NGG1p interacting factor 3)-like(7509.1.1)

FFamilyDUF34_NIF3(7509.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01784DUF34_NIF3

Duf34/NIF3 (NGG1p interacting factor 3)

External Links

ECOD PDB View: 1NMP RCSB PDB: 1NMP PDBe: 1NMP UniProt: P0AFP6

Downloads

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