ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nmyB2 - ECOD Domain | ECOD

ECOD/Domains/e4nmyB2

e4nmyB2

UID: 002601470

PDB

Range: B:100-184
PDB: 4NMY chain B(all domains)
UniProt: Q187U0 (all domains)
Gene: CD630_19790

Molecule: ABC-type transport system, extracellular solute-binding protein

3D Structure

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Related Domains

Browse other domains in NMT1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyNMT1(7523.1.1.19)

Ligands

in contact, ≤ 4 Å

ThiamineVIB
drugDrugBank DB00152

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NMT1/THI5 like

ClanCL0177PBP

External Links

ECOD PDB View: 4NMY RCSB PDB: 4NMY PDBe: 4NMY UniProt: Q187U0

Downloads

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