ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2nydB3 - ECOD Domain | ECOD

ECOD/Domains/e2nydB3

e2nydB3

UID: 002601489

PDB

Range: B:-3-123,B:324-366
PDB: 2NYD chain B(all domains)
UniProt: P67273 (all domains)
Gene: SA1388

Molecule: UPF0135 protein SA1388

3D Structure

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Related Domains

Browse other domains in DUF34_NIF3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNIF3 (NGG1p interacting factor 3)-like(7509)

HH-groupNIF3 (NGG1p interacting factor 3)-like(7509.1)

TT-groupNIF3 (NGG1p interacting factor 3)-like(7509.1.1)

FFamilyDUF34_NIF3(7509.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01784DUF34_NIF3

Duf34/NIF3 (NGG1p interacting factor 3)

External Links

ECOD PDB View: 2NYD RCSB PDB: 2NYD PDBe: 2NYD UniProt: P67273

Downloads

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