ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r8kB2 - ECOD Domain | ECOD

ECOD/Domains/e1r8kB2

e1r8kB2

UID: 002601800

PDB

Range: B:3-146,B:288-328
PDB: 1R8K chain B(all domains)
UniProt: P58717 (all domains)
Gene: pdxA

Molecule: 4-hydroxythreonine-4-phosphate dehydrogenase 1

3D Structure

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Related Domains

Browse other domains in PdxA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupIsocitrate/Isopropylmalate dehydrogenase-like(7510)

HH-groupIsocitrate/Isopropylmalate dehydrogenase-like(7510.1)

TT-groupIsocitrate/Isopropylmalate dehydrogenase-like(7510.1.1)

FFamilyPdxA(7510.1.1.5)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Pyridoxal phosphate biosynthetic protein PdxA

ClanCL0270Iso_DH

External Links

ECOD PDB View: 1R8K RCSB PDB: 1R8K PDBe: 1R8K UniProt: P58717

Downloads

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Drug annotations from DrugDomain.