ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vyrA1 - ECOD Domain | ECOD

ECOD/Domains/e5vyrA1

e5vyrA1

UID: 002603292

PDB

Range: A:202-251
PDB: 5VYR chain A(all domains)
UniProt: F8WJP6 (all domains)
Gene: wbkC

Molecule: Gdp-mannose 4,6-dehydratase / gdp-4-amino-4,6-dideoxy-d-mannose formyltransferase

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

GuanosineGMP
drugDrugBank DB02857

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

External Links

ECOD PDB View: 5VYR RCSB PDB: 5VYR PDBe: 5VYR UniProt: F8WJP6

Downloads

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