ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kymA1 - ECOD Domain | ECOD

ECOD/Domains/e5kymA1

e5kymA1

UID: 002603310

RepresentativePDB

Range: A:1-247
PDB: 5KYM chain A(all domains)
UniProt: Q9X219 (all domains)
Gene: TM_1693

Molecule: 1-acyl-sn-glycerol-3-phosphate acyltransferase

3D Structure

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Related Domains

Browse other domains in Acyltransferase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupGlycerol-3-phosphate (1)-acyltransferase(7558)

HH-groupGlycerol-3-phosphate (1)-acyltransferase(7558.1)

TT-groupGlycerol-3-phosphate (1)-acyltransferase(7558.1.1)

FFamilyAcyltransferase(7558.1.1.1)

Ligands

in contact, ≤ 4 Å

nonaneDD9
1-HEPTADECANOYL-2-TRIDECANOYL-3-GLYCEROL-PHOSPHONYL CHOLINEHGX

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Pfam Families

PF01553Acyltransferase

Acyltransferase

ClanCL0228Acyltransferase

External Links

ECOD PDB View: 5KYM RCSB PDB: 5KYM PDBe: 5KYM UniProt: Q9X219

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.