ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ndvL43 - ECOD Domain | ECOD

ECOD/Domains/e5ndvL43

e5ndvL43

UID: 002603535

PDB

Range: L4:2-275
PDB: 5NDV chain L4(all domains)
UniProt: P10664 (all domains)
Gene: RPL4A

Molecule: 60S ribosomal protein L4-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_L4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibosomal protein L4(7559)

HH-groupRibosomal protein L4(7559.1)

TT-groupRibosomal protein L4(7559.1.1)

FFamilyRibosomal_L4(7559.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
ParomomycinPAR

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00573Ribosomal_L4

Ribosomal protein L4/L1 family

External Links

ECOD PDB View: 5NDV RCSB PDB: 5NDV PDBe: 5NDV UniProt: P10664

Downloads

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