ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5yo9A2 - ECOD Domain | ECOD

ECOD/Domains/e5yo9A2

e5yo9A2

UID: 002603924

PDB

Range: A:-2-216
PDB: 5YO9 chain A(all domains)
UniProt: V5VGF8 (all domains)

Molecule: 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in ACP_syn_III →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiolase-like(7581)

HH-groupThiolase-like(7581.1)

TT-groupThiolase-like(7581.1.1)

FFamilyACP_syn_III(7581.1.1.13)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08545ACP_syn_III

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III

ClanCL0046Thiolase

External Links

ECOD PDB View: 5YO9 RCSB PDB: 5YO9 PDBe: 5YO9 UniProt: V5VGF8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure