ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6n2oD1 - ECOD Domain | ECOD

ECOD/Domains/e6n2oD1

e6n2oD1

UID: 002604032

PDB

Range: D:2-268
PDB: 6N2O chain D(all domains)
UniProt: A0L8G5 (all domains)
Gene: Mmc1_1750

Molecule: Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_C,PFO_beta_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTPP_enzyme_C,PFO_beta_C(7574.1.1.6)

Ligands

in contact, ≤ 4 Å

Succinyl-Coenzyme ASCA
drugDrugBank DB03699
Magnesium ionMG
metal
Iron/sulfur cluster

Pfam Families

PF02775TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

ClanCL0254THDP-binding

PF12367PFO_beta_C

Pyruvate ferredoxin oxidoreductase beta subunit C terminal

External Links

ECOD PDB View: 6N2O RCSB PDB: 6N2O PDBe: 6N2O UniProt: A0L8G5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.