ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gfmA2 - ECOD Domain | ECOD

ECOD/Domains/e6gfmA2

e6gfmA2

UID: 002604112

PDB

Range: A:110-437
PDB: 6GFM chain A(all domains)
UniProt: P0ADR8 (all domains)
Gene: ppnN

Molecule: Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase

3D Structure

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Related Domains

Browse other domains in Lysine_decarbox,PpnN_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMCP/YpsA-related(7563)

HH-groupMCP/YpsA-related(7563.1)

TT-groupMCP/YpsA-related(7563.1.1)

FFamilyLysine_decarbox,PpnN_C(7563.1.1.3)

Ligands

in contact, ≤ 4 Å

guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)0O2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03641Lysine_decarbox

Possible lysine decarboxylase

ClanCL0349SLOG

Pyrimidine/purine nucleotide monophosphate nucleosidase, C-terminal

ClanCL0349SLOG

External Links

ECOD PDB View: 6GFM RCSB PDB: 6GFM PDBe: 6GFM UniProt: P0ADR8

Downloads

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