ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bx9A1 - ECOD Domain | ECOD

ECOD/Domains/e4bx9A1

e4bx9A1

UID: 002605457

PDB

Range: A:2-143
PDB: 4BX9 chain A(all domains)
UniProt: Q96AX1 (all domains)
Gene: VPS33A

Molecule: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33A

3D Structure

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Related Domains

Browse other domains in Sec1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like domains in Sec1/munc18-like proteins(7585)

HH-groupRossmann-like domains in Sec1/munc18-like proteins(7585.1)

TT-groupRossmann-like domains in Sec1/munc18-like proteins(7585.1.1)

FFamilySec1(7585.1.1.1)

Ligands

in contact, ≤ 4 Å

(2S)-2-hydroxybutanedioic acidLMR

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sec1 family

External Links

ECOD PDB View: 4BX9 RCSB PDB: 4BX9 PDBe: 4BX9 UniProt: Q96AX1

Downloads

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