ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1eqbA3 - ECOD Domain | ECOD

ECOD/Domains/e1eqbA3

e1eqbA3

UID: 002605523

PDB

Range: A:2-279
PDB: 1EQB chain A(all domains)
UniProt: P0A825 (all domains)
Gene: glyA

Molecule: SERINE HYDROXYMETHYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilySHMT(7577.1.1.5)

Ligands

in contact, ≤ 4 Å

LevoleucovorinFFO
drugDrugBank DB11596
GlycineGLY
drugDrugBank DB00145

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 1EQB RCSB PDB: 1EQB PDBe: 1EQB UniProt: P0A825

Downloads

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Pyridoxal phosphate

drugDrugBank DB00114

Shown in the structure viewer. Drug annotations from DrugDomain.