ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xbnA2 - ECOD Domain | ECOD

ECOD/Domains/e2xbnA2

e2xbnA2

UID: 002606150

PDB

Range: A:61-315
PDB: 2XBN chain A(all domains)
UniProt: Q93UV0 (all domains)
Gene: spt

Molecule: SERINE PALMITOYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_1_2(7577.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxamine-5'-PhosphatePMP
drugDrugBank DB02142
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 2XBN RCSB PDB: 2XBN PDBe: 2XBN UniProt: Q93UV0

Downloads

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