ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6kl5A1 - ECOD Domain | ECOD

ECOD/Domains/e6kl5A1

e6kl5A1

UID: 002607334

PDB

Range: A:41-163
PDB: 6KL5 chain A(all domains)
UniProt: A0A0D3MU65 (all domains)

Molecule: Nucleoprotein

3D Structure

Loading viewer...

Related Domains

Browse other domains in CoV_nucleocap →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704)

HH-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704.1)

TT-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704.1.1)

FFamilyCoV_nucleocap(704.1.1.1)

Ligands

in contact, ≤ 4 Å

(phenylmethyl) (2S)-2-(hydroxymethyl)-2,3-dihydroindole-1-carboxylateDJO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00937CoV_nucleocap

Coronavirus nucleocapsid

External Links

ECOD PDB View: 6KL5 RCSB PDB: 6KL5 PDBe: 6KL5 UniProt: A0A0D3MU65

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure