ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kl6B1 - ECOD Domain | ECOD

ECOD/Domains/e6kl6B1

e6kl6B1

UID: 002607338

PDB

Range: B:41-164
PDB: 6KL6 chain B(all domains)
UniProt: A0A0D3MU65 (all domains)

Molecule: Nucleoprotein

3D Structure

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Related Domains

Browse other domains in CoV_nucleocap →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704)

HH-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704.1)

TT-groupCoronavirus RNA-binding domain (N-terminal part of Pfam 00937)(704.1.1)

FFamilyCoV_nucleocap(704.1.1.1)

Ligands

in contact, ≤ 4 Å

N,N-dimethyl-1-(5-phenylmethoxy-1H-indol-3-yl)methanamineDJU

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00937CoV_nucleocap

Coronavirus nucleocapsid

External Links

ECOD PDB View: 6KL6 RCSB PDB: 6KL6 PDBe: 6KL6 UniProt: A0A0D3MU65

Downloads

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