ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jq9A1 - ECOD Domain | ECOD

ECOD/Domains/e6jq9A1

e6jq9A1

UID: 002607743

PDB

Range: A:40-521
PDB: 6JQ9 chain A(all domains)
UniProt: A0A109PTH9 (all domains)
Gene: LOR_107

Molecule: Short ulvan lyase

3D Structure

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Related Domains

Browse other domains in BNR_4 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyBNR_4(5.1.4.51)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

BNR repeat-containing family member

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6JQ9 RCSB PDB: 6JQ9 PDBe: 6JQ9 UniProt: A0A109PTH9

Downloads

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