ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6oboB1 - ECOD Domain | ECOD

ECOD/Domains/e6oboB1

e6oboB1

UID: 002607883

PDB

Range: B:5-261
PDB: 6OBO chain B(all domains)
UniProt: P02879 (all domains)

Molecule: Ricin A chain

3D Structure

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Related Domains

Browse other domains in RIP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRIP/Polo-box domain(292)

HH-groupRibosome inactivating proteins (RIP)(292.1)

TT-groupRibosome inactivating proteins (RIP)(292.1.1)

FFamilyRIP(292.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ribosome inactivating protein

External Links

ECOD PDB View: 6OBO RCSB PDB: 6OBO PDBe: 6OBO UniProt: P02879

Downloads

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