ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6r0pB1 - ECOD Domain | ECOD

ECOD/Domains/e6r0pB1

e6r0pB1

UID: 002608034

PDB

Range: B:0-160
PDB: 6R0P chain B(all domains)
UniProt: A0A143SL92 (all domains)
Gene: nsP1234

Molecule: Non-structural polyprotein

3D Structure

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Related Domains

Browse other domains in Macro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMacro domain-like(7529)

HH-groupMacro domain-like(7529.1)

TT-groupMacro domain-like(7529.1.1)

FFamilyMacro(7529.1.1.1)

Ligands

in contact, ≤ 4 Å

[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{S})-2,3,4,5-tetrakis(oxidanyl)pentyl] hydrogen phosphateJNT

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

Macro domain

ClanCL0223MACRO

External Links

ECOD PDB View: 6R0P RCSB PDB: 6R0P PDBe: 6R0P UniProt: A0A143SL92

Downloads

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Drug annotations from DrugDomain.