ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5r4kA1 - ECOD Domain | ECOD

ECOD/Domains/e5r4kA1

e5r4kA1

UID: 002608053

PDB

Range: A:2793-2911
PDB: 5R4K chain A(all domains)
UniProt: Q12830 (all domains)
Gene: BPTF

Molecule: Nucleosome-remodeling factor subunit BPTF

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

methyl 1-(tert-butylcarbamoyl)piperidine-4-carboxylateK0V

+ 2 additives (Dimethyl sulfoxide, Tromethamine)

Dimethyl sulfoxideDMS
DrugBank DB01093
Tromethamine

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5R4K RCSB PDB: 5R4K PDBe: 5R4K UniProt: Q12830

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.