ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jk3A2 - ECOD Domain | ECOD

ECOD/Domains/e4jk3A2

e4jk3A2

UID: 002617837

PDB

Range: A:5-121
PDB: 4JK3 chain A(all domains)
UniProt: Q46E80 (all domains)
Gene: pylD

Molecule: PylD

3D Structure

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Related Domains

Browse other domains in PylD_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyPylD_N(2007.1.1.21)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Pyrrolysine biosynthesis protein PylD, N-terminal domain

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 4JK3 RCSB PDB: 4JK3 PDBe: 4JK3 UniProt: Q46E80

Downloads

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