ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vl7B1 - ECOD Domain | ECOD

ECOD/Domains/e6vl7B1

e6vl7B1

UID: 002618866

PDB

Range: B:4-363
PDB: 6VL7 chain B(all domains)
UniProt: A0A161XU12 (all domains)
Gene: N475_19905

Molecule: Glycine oxidase

3D Structure

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Related Domains

Browse other domains in LodA_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyLodA_N(11.1.1.255)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

L-Lysine epsilon oxidase N-terminal

ClanCL0159E-set

External Links

ECOD PDB View: 6VL7 RCSB PDB: 6VL7 PDBe: 6VL7 UniProt: A0A161XU12

Downloads

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