ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vmfC1 - ECOD Domain | ECOD

ECOD/Domains/e6vmfC1

e6vmfC1

UID: 002618876

PDB

Range: C:364-816
PDB: 6VMF chain C(all domains)
UniProt: A0A161XU12 (all domains)
Gene: N475_19905

Molecule: Glycine oxidase

3D Structure

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Related Domains

Browse other domains in LodA_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupL-Lys epsilon-oxidase C-terminal domain(3752)

HH-groupL-Lys epsilon-oxidase C-terminal domain(3752.1)

TT-groupL-Lys epsilon-oxidase C-terminal domain(3752.1.1)

FFamilyLodA_C(3752.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

L-lysine epsilon oxidase C-terminal domain

External Links

ECOD PDB View: 6VMF RCSB PDB: 6VMF PDBe: 6VMF UniProt: A0A161XU12

Downloads

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