ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6vw8B3 - ECOD Domain | ECOD

ECOD/Domains/e6vw8B3

e6vw8B3

UID: 002618962

PDB

Range: B:425-514
PDB: 6VW8 chain B(all domains)
UniProt: Q0KDY2 (all domains)
Gene: fdsB

Molecule: NAD-dependent formate dehydrogenase beta subunit

3D Structure

Loading viewer...

Related Domains

Browse other domains in NADH_4Fe-4S →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupNqo1C-terminal domain-like(633.11)

TT-groupNqo1C-terminal domain-like(633.11.1)

FFamilyNADH_4Fe-4S(633.11.1.1)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10589NADH_4Fe-4S

NADH-ubiquinone oxidoreductase-F iron-sulfur binding region

External Links

ECOD PDB View: 6VW8 RCSB PDB: 6VW8 PDBe: 6VW8 UniProt: Q0KDY2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure