ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rp0A1 - ECOD Domain | ECOD

ECOD/Domains/e6rp0A1

e6rp0A1

UID: 002619532

PDB

Range: A:1-131
PDB: 6RP0 chain A(all domains)

Molecule: FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE

3D Structure

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Related Domains

Browse other domains in Fapy_DNA_glyco →

Classification

AArchitecturebeta barrels(a.1)

XX-groupMutM N-terminal domain-like(3504)

HH-groupN-terminal domain of MutM-like DNA repair proteins(3504.2)

TT-groupN-terminal domain of MutM-like DNA repair proteins(3504.2.1)

FFamilyFapy_DNA_glyco(3504.2.1.1)

Ligands

in contact, ≤ 4 Å

2,8-dithioxo-1,2,3,7,8,9-hexahydro-6H-purin-6-one5JL

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01149Fapy_DNA_glyco

Formamidopyrimidine-DNA glycosylase N-terminal domain

External Links

ECOD PDB View: 6RP0 RCSB PDB: 6RP0 PDBe: 6RP0

Downloads

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